Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940220.1_cds_XP_016484532.1_75538
CDS Infomation

[gene=LOC107805066] [db_xref=GeneID:107805066] [protein=high mobility group B protein 15-like] [protein_id=XP_016484532.1] [location=join(603..769,1894..1972,2131..2290,2366..2491,3912..4315,4703..5194)] [gbkey=CDS]
Sequence

ATGGCATCCTCTTCTGCTGAAAATAGTCCAGTGCCACTCAGAGTAGCACCCCCAAATTAT
CATCCATATCCACCTCCATTGGCTTCATATGAAAATGTTGTGGCCTCTCCTCAACTTTTT
ATGGATACTTTGCAGAAGTTCCATGCTGCTATGAGAACCAAGTTCATGATCCCTGTTATA
GGGGGGAAACCGTTGGATTTGCATCGCCTCTTTGTCGAGGTAACTACTCGTGGTGGTATC
GCAAAGGTTCTAGGGGGAAAAAGATGGAAAGAAGTAACAACAGTTTTTAGCTTTCCTTCT
TCAGCCACGAATGCTTCATTTATCCTCCGGAAGTATTATATTTCATTGATCTATCACTAC
GAAAGAGTCTACTATTTCAAGGCGAAGCACTGGACCCCTTCTCCTGATGTGTTGCAGCAA
GTTTCACATGCTGCAGCTCCACCACATGGCTTGGCCGGATATGTGCTTCCATCACCAGAA
ATAGAAGCTGCCACGCCCAAGTTGCAGATGATAGAAACAACATTTCCTGAAGAAACTGCA
GCACCATCAACAGGTTCGCCATTGTGTGGTGTCATTGATGGCAAGTTTGAGAGTGGATAT
CTTATCACAGTGAAGATCGGTTCTGAAGATTTTAAAGGTGTTCTATATCAGGTTCCAATG
AACACAATGCATCAAGAGTTGCAAAATCAGAATCTACCTGTTTATAACACGGGGAAAGCA
GCATCGACGGCAACTGGAGTAGTTCGAAGAAAGCGTAGGAAGAAATGTGAAATTAAGAAG
CGCGATCCTGCTCATCCTAAGCCTAACCGAAGTGGTTATAACTTTTTCTTCGCAGAACAA
CACGCCAGGCTGAAACCTCTCTATCCTGGGAAGGATAGGGAGATTAGTCGGATGATAGGT
GAATTGTGGAACAACCTAAACGTACCCGAGAAAATGGTTTATCAGGAGAGAGCCTTGCAA
GACAAAGAACGATACAGATTGGAGATGGAAGGCTATCGCGAGAGATTAAGAACAGGGCAA
GTGGTTAATAATCCGCTGCAAATACAACAACTTCCTATTGAACACAATGTCGATATGATT
GATGTGCAGAGTGAACTACCAAGTGAAAACGGAAACGTTTCTTGGAGTCCAGAGTACAGA
CCAAGTTCCGATAAATGTGCGAAAAGCAACTTGGAGAACAGTGAAGGCACAAACCCGAAT
TTAGATGCAAAGGCTCCAAAGGCAACCAACAACGTGGGCGTGGAAGCATTGGGCGATGAA
GAGGAATTCGAGTTACTTAAGAGAGTCGACATGGTTGAATGTGAGGATAAAGAAATGCAG
GAAGAAGAAGAAGAAGAAGCTGATAAACAAGAACTTCAACATAGTAAGGAGAAAGTTTTG
TTTTTCCTAGAAGATAAAACTTTATTACCAACTGTGGAGAAAATATAA

Peptide Sequence

PEP ID

XP_016484532.1
PEP Infomation

PREDICTED: high mobility group B protein 15-like [Nicotiana tabacum]
Sequence

MASSSAENSPVPLRVAPPNYHPYPPPLASYENVVASPQLFMDTLQKFHAAMRTKFMIPVI
GGKPLDLHRLFVEVTTRGGIAKVLGGKRWKEVTTVFSFPSSATNASFILRKYYISLIYHY
ERVYYFKAKHWTPSPDVLQQVSHAAAPPHGLAGYVLPSPEIEAATPKLQMIETTFPEETA
APSTGSPLCGVIDGKFESGYLITVKIGSEDFKGVLYQVPMNTMHQELQNQNLPVYNTGKA
ASTATGVVRRKRRKKCEIKKRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIG
ELWNNLNVPEKMVYQERALQDKERYRLEMEGYRERLRTGQVVNNPLQIQQLPIEHNVDMI
DVQSELPSENGNVSWSPEYRPSSDKCAKSNLENSEGTNPNLDAKAPKATNNVGVEALGDE
EEFELLKRVDMVECEDKEMQEEEEEEADKQELQHSKEKVLFFLEDKTLLPTVEKI

Transcript Sequence

Gene sequence data has not been registered.